Reverse transcription polymerase chain reaction (RT-PCR) detection for Australian Cherax reovirus from redclaw crayfish (Cherax quadricarinatus)
نویسندگان
چکیده
Reoviruses have been isolated from many aquatic animals including fish and crustaceans. Viral inclusion bodies of reovirus found in the cytoplasm hepatopancreatic cells redclaw crayfish (Cherax quadricarinatus). In past, reverse transcription polymerase chain reaction (RT-PCR) designed across other hosts was attempted to detect but no specific set primers successfully identified infected crayfish. this study, two new sets (Reo35F - Reo585R Reo35F Seq.R1) producing a 551 bp product 1370 respectively were using C. quadricarinatus partial sequence (NCBI GenBank accession no. KM405245). After removal primer sequences, smaller PCR 99.21% match KM405245 while larger 99.32% match. Only three amino acid differences observed between Australian Chinese sequences. The is ancestral so changes are reported that order: i.e. Australian>Chinese: 19Arg>Lys; 363Leu>Met; 423Gly>Asp. longer Cherax inclusive has submitted NCBI number MN308286. second used world's first RT-PCR diagnostic method detection limit 1000 genome equivalents, showed cross-reactions with prawn pathogens indicating its high sensitivity specificity for diagnosis.
منابع مشابه
Distribution and establishment of the alien Australian redclaw crayfish, Cherax quadricarinatus, in South Africa and Swaziland
BACKGROUND The Australian redclaw crayfish (Cherax quadricarinatus, von Martens), is native to Australasia, but has been widely translocated around the world due to aquaculture and aquarium trade. Mostly as a result of escape from aquaculture facilities, this species has established extralimital populations in Australia and alien populations in Europe, Asia, Central America and Africa. In South...
متن کاملDistribution and establishment of the alien Australian redclaw crayfish, Cherax quadricarinatus, in South Africa and Swaziland
متن کامل
Direct Age Determination of a Subtropical Freshwater Crayfish (Redclaw, Cherax quadricarinatus) Using Ossicular Growth Marks
Recent studies have reported that crustacean age determination is possible. We applied a direct ageing method (i.e. transverse cross sectioning of gastric ossicles) to a subtropical freshwater crayfish (Cherax quadricarinatus) sourced from an aquaculture population. Growth mark periodicity and the potential for chronological depositions were investigated by staining C. quadricarinatus with calc...
متن کاملNatural infection of the redclaw crayfish Cherax quadricarinatus with presumptive spawner-isolated mortality virus.
Crayfish farmers reported reduced tolerance of stress in specimens of Cherax quadricarinatus, which were formerly robust crayfish. Furthermore, one farmer reported a large reduction in yield with final harvest only equaling the stocking weight. Upon trapping, one-third of the crayfish regularly died overnight and a further one-third died on the sorting tray during sexing of juveniles (approxima...
متن کاملReverse transcriptase-polymerase chain reaction (rt-PCR).
Reverse transcriptase polymerase chain reaction (RT-PCR) has become a well-established and powerful molecular technique for studying ribonucleic acids. It is used in medical diagnostics for detecting viral RNA, in hematology and oncology for detecting chimeric transcripts of rearranged genes (1), and in the broad area of research applications in gene expression studies. Since its introduction (...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
ژورنال
عنوان ژورنال: Aquaculture
سال: 2021
ISSN: ['0044-8486', '1873-5622']
DOI: https://doi.org/10.1016/j.aquaculture.2020.735881